miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|169232579|gb|EY025827.1|EY025827 CAGAGGCTATGTTTCAGCCAGCCCTCCTTGGCATGGAATCTGCTGGCATCCATGAAACCACCTACAATTCCATCATGAAG
TGTGATGTTGACATCCGTAAAGATCTGTATGCCAACACTGTGCTTTCTGGTGGTTCCACCATGTACCCAGGTATTGCTGA
CCGCATGCAAAAGGAAATTGCTTCTCTCGCTCCACCAACCATGAAGATCAAGATCATTGCTCCCCCAGAGCGTAAATATT
CTGTCTGGATTGGAGGCTCCATCTTGGCATCTCTTTCCACCTTCCAGCAGATGTGGATCTCCAAGCAAGAATATGATGAG
TCTGGTCCTGCAATTGTGCACCGCAAGTGCTTCTAAAGTCACTGGAAATGTCCAAAAGTGAAAAGTTGCGTTCTAGTAGA
CCAATCAACATGAAAGAAGACAGTGGTCATAAGACAAAAAATAATAAAATGAAAAACAGGAATTGTGACGTTCTGTACAT
TTGTGTTAACTTGTGATAATGATTCAAGTGCATTGTGCAATAAATGAGTGTTTTGTTGTGTTAAAATAACTAATAAAAAA
TGTTTTGAAACAA




Most similar to sp|Q00215|ACTC_STYPL

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q00215|ACTC_STYPL Actin, cytoplasmic OS=Styela plicata PE=3 SV=1
          Length = 375

 Score =  231 bits (590), Expect = 2e-60
 Identities = 111/117 (94%), Positives = 116/117 (99%)
 Frame = +3

Query: 3   EAMFQPALLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEIA 182
           EAMFQP+ LGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGG+TMYPGIADRMQKEI+
Sbjct: 259 EAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEIS 318

Query: 183 SLAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPAIVHRKCF 353
           +LAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP+IVHRKCF
Sbjct: 319 ALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375